BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037A06SP1|AL430327
(896 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1446 1726 0.0
>3x_Contig1446
Length = 10598
Score = 1726 bits (869), Expect = 0.0
Identities = 893/899 (99%), Gaps = 3/899 (0%)
Strand = Plus / Minus
Query: 1 atgccaagagttatcagaatagcaagaagtctgtaaccccaccgagaccgaaacaaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1726 atgccaagagttatcagaatagcaagaagtctgtaaccccaccgagaccgaaacaaccct 1667
Query: 61 ctgaaaaaaataagcgagcgacttcgttctccaatgagaacagaaactctagttctgtac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1666 ctgaaaaaaataagcgagcgacttcgttctccaatgagaacagaaactctagttctgtac 1607
Query: 121 cactggcaaaaaaccaggctaaaaagacggctaattcagggtctgctgttggatctgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1606 cactggcaaaaaaccaggctaaaaagacggctaattcagggtctgctgttggatctgaat 1547
Query: 181 caaggatctcatcatcgggttcagaatcatcttcaaatgtcaattctgctacgggttctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1546 caaggatctcatcatcgggttcagaatcatcttcaaatgtcaattctgctacgggttctt 1487
Query: 241 cggaggaacctgacgtacacacccagcataaaatggccagaaaggacagttaccttagtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1486 cggaggaacctgacgtacacacccagcataaaatggccagaaaggacagttaccttagtg 1427
Query: 301 gattccaaagcaaggccagaagcccagaatctcctttccaagacccagcacaacggcatt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1426 gattccaaagcaaggccagaagcccagaatctcctttccaagacccagcacaacggcatt 1367
Query: 361 ttgtgagaaccaagtacgtctccagtcgctacgacaagcgctcgttatccccagttaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1366 ttgtgagaaccaagtacgtctccagtcgctacgacaagcgctcgttatccccagttaaaa 1307
Query: 421 ctactccaaactcaagcacagagacattaaatwatgttaagaacattttcaatagtatga 480
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1306 ctactccaaactcaagcacagagacattaaataatgttaagaacattttcaatagtatga 1247
Query: 481 gtgataggctgagacacactctctttggaaatagcaatggtgacgcagaagatgaggatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1246 gtgataggctgagacacactctctttggaaatagcaatggtgacgcagaagatgaggatc 1187
Query: 541 aacacaatacgcagcatgatactgaacgtttattcaaaagggccaaactacccgggcgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1186 aacacaatacgcagcatgatactgaacgtttattcaaaagggccaaactacccgggcgaa 1127
Query: 601 agatcctgacagatgaggaaattgatgaaattgtgaagcaacagaatgaggcagaaagta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1126 agatcctgacagatgaggaaattgatgaaattgtgaagcaacagaatgaggcagaaagta 1067
Query: 661 atgacccagacagacaggactacggtaatagtttcaatttaaatgttgataatttgagtg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1066 atgacccagacagacaggactacggtaatagtttcaatttaaatgttgataatttgagtg 1007
Query: 721 tcaacacccaggattttwatcacatctcagaaccatcacccgagaaagaagagacaaaag 780
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1006 tcaacacccaggattttaatcacatctcagaaccatcacccgagaaagaagagacaaaag 947
Query: 781 ctaacaaagctccgtttcttgaagaagtgtacgaaatcaaaagtgat-amgagcatttgg 839
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 946 ctaacaaagctccgtttcttgaagaagtgtacgaaatcaaaagtgataacgagcatttgg 887
Query: 840 aag-aaaggctgcggtgagcccagatgacggtattgata-cctgggacttaatgaactg 896
||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 886 aagaaaaggctgcggtgagcccagatgacggtattgataccctgggacttaatgaactg 828
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6058
Number of Sequences: 1807
Number of extensions: 6058
Number of successful extensions: 42
Number of sequences better than 1.0e-20: 1
length of query: 896
length of database: 10,358,551
effective HSP length: 16
effective length of query: 880
effective length of database: 10,329,639
effective search space: 9090082320
effective search space used: 9090082320
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)